Review



smart-seq2 libraries  (Broad Technology Labs)

 
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
    • 90
      Buy from Supplier

    Structured Review

    Broad Technology Labs smart-seq2 libraries
    Smart Seq2 Libraries, supplied by Broad Technology Labs, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq2+libraries/pm37749326-358-0-5?v=Broad+Technology+Labs
    Average 90 stars, based on 1 article reviews
    smart-seq2 libraries - by Bioz Stars, 2026-06
    90/100 stars

    Images



    Similar Products

    smart seq2 library sequencing  (Novogene)
    86
    Novogene smart seq2 library sequencing
    Increased chromatin accessibility in knockout round spermatids. A).Volcano plot of DEGs between control and Eif5a SKO samples.FDR<0.05. B.The average tag density plot(top pannel) and heatmaps (bottom pannel)around TSS (±3 kb) for the enrichment of ATAC‐seq reads in control and Eif5a SKO round spermatids. C).Plot shows Gain and Loss sites in all control and Eif5a SKO sample replicates. D).Venn diagram showing the overlap of differential peaks identified by CUT&Tag and ATAC‐seq between WT and CKO groups. E).Four‐quadrant scatter plot comparing the log 2 fold changes of significantly differential peaks (FDR < 0.05) from H3K4me3 CUT&Tag (x‐axis) and ATAC‐seq (y‐axis). The Pearson correlation coefficient for the compared data is 0.468. Pearson's *r* = 0.468. F) Venn diagram show shared genes between ATAC‐seq (FDR<0.05) <t>and</t> <t>Smart‐seq2</t> (FDR<0.05, FC>1.5).
    Smart Seq2 Library Sequencing, supplied by Novogene, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq2+libraries/pmc12903998-283-1-7?v=Novogene
    Average 86 stars, based on 1 article reviews
    smart seq2 library sequencing - by Bioz Stars, 2026-06
    86/100 stars
    		  Buy from Supplier
    smart-seq2 library sequencing  (Novogene)
    90
    Novogene smart-seq2 library sequencing
    Increased chromatin accessibility in knockout round spermatids. A).Volcano plot of DEGs between control and Eif5a SKO samples.FDR<0.05. B.The average tag density plot(top pannel) and heatmaps (bottom pannel)around TSS (±3 kb) for the enrichment of ATAC‐seq reads in control and Eif5a SKO round spermatids. C).Plot shows Gain and Loss sites in all control and Eif5a SKO sample replicates. D).Venn diagram showing the overlap of differential peaks identified by CUT&Tag and ATAC‐seq between WT and CKO groups. E).Four‐quadrant scatter plot comparing the log 2 fold changes of significantly differential peaks (FDR < 0.05) from H3K4me3 CUT&Tag (x‐axis) and ATAC‐seq (y‐axis). The Pearson correlation coefficient for the compared data is 0.468. Pearson's *r* = 0.468. F) Venn diagram show shared genes between ATAC‐seq (FDR<0.05) <t>and</t> <t>Smart‐seq2</t> (FDR<0.05, FC>1.5).
    Smart Seq2 Library Sequencing, supplied by Novogene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq2+libraries/pm38889293-401-1-8?v=Novogene
    Average 90 stars, based on 1 article reviews
    smart-seq2 library sequencing - by Bioz Stars, 2026-06
    90/100 stars
    		  Buy from Supplier
    smart-seq2 libraries  (Illumina Inc)
    90
    Illumina Inc smart-seq2 libraries
    Increased chromatin accessibility in knockout round spermatids. A).Volcano plot of DEGs between control and Eif5a SKO samples.FDR<0.05. B.The average tag density plot(top pannel) and heatmaps (bottom pannel)around TSS (±3 kb) for the enrichment of ATAC‐seq reads in control and Eif5a SKO round spermatids. C).Plot shows Gain and Loss sites in all control and Eif5a SKO sample replicates. D).Venn diagram showing the overlap of differential peaks identified by CUT&Tag and ATAC‐seq between WT and CKO groups. E).Four‐quadrant scatter plot comparing the log 2 fold changes of significantly differential peaks (FDR < 0.05) from H3K4me3 CUT&Tag (x‐axis) and ATAC‐seq (y‐axis). The Pearson correlation coefficient for the compared data is 0.468. Pearson's *r* = 0.468. F) Venn diagram show shared genes between ATAC‐seq (FDR<0.05) <t>and</t> <t>Smart‐seq2</t> (FDR<0.05, FC>1.5).
    Smart Seq2 Libraries, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq2+libraries/pmc11127180-700-0-6?v=Illumina+Inc
    Average 90 stars, based on 1 article reviews
    smart-seq2 libraries - by Bioz Stars, 2026-06
    90/100 stars
    		  Buy from Supplier
    smart-seq2 library preparation kit  (Nextera AS)
    90
    Nextera AS smart-seq2 library preparation kit
    Increased chromatin accessibility in knockout round spermatids. A).Volcano plot of DEGs between control and Eif5a SKO samples.FDR<0.05. B.The average tag density plot(top pannel) and heatmaps (bottom pannel)around TSS (±3 kb) for the enrichment of ATAC‐seq reads in control and Eif5a SKO round spermatids. C).Plot shows Gain and Loss sites in all control and Eif5a SKO sample replicates. D).Venn diagram showing the overlap of differential peaks identified by CUT&Tag and ATAC‐seq between WT and CKO groups. E).Four‐quadrant scatter plot comparing the log 2 fold changes of significantly differential peaks (FDR < 0.05) from H3K4me3 CUT&Tag (x‐axis) and ATAC‐seq (y‐axis). The Pearson correlation coefficient for the compared data is 0.468. Pearson's *r* = 0.468. F) Venn diagram show shared genes between ATAC‐seq (FDR<0.05) <t>and</t> <t>Smart‐seq2</t> (FDR<0.05, FC>1.5).
    Smart Seq2 Library Preparation Kit, supplied by Nextera AS, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq2+libraries/pm38589415-120-0-17?v=Nextera+AS
    Average 90 stars, based on 1 article reviews
    smart-seq2 library preparation kit - by Bioz Stars, 2026-06
    90/100 stars
    		  Buy from Supplier
    smart-seq2 library preparation  (Illumina Inc)
    90
    Illumina Inc smart-seq2 library preparation
    Increased chromatin accessibility in knockout round spermatids. A).Volcano plot of DEGs between control and Eif5a SKO samples.FDR<0.05. B.The average tag density plot(top pannel) and heatmaps (bottom pannel)around TSS (±3 kb) for the enrichment of ATAC‐seq reads in control and Eif5a SKO round spermatids. C).Plot shows Gain and Loss sites in all control and Eif5a SKO sample replicates. D).Venn diagram showing the overlap of differential peaks identified by CUT&Tag and ATAC‐seq between WT and CKO groups. E).Four‐quadrant scatter plot comparing the log 2 fold changes of significantly differential peaks (FDR < 0.05) from H3K4me3 CUT&Tag (x‐axis) and ATAC‐seq (y‐axis). The Pearson correlation coefficient for the compared data is 0.468. Pearson's *r* = 0.468. F) Venn diagram show shared genes between ATAC‐seq (FDR<0.05) <t>and</t> <t>Smart‐seq2</t> (FDR<0.05, FC>1.5).
    Smart Seq2 Library Preparation, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq2+libraries/pmc11001867-115-0-26?v=Illumina+Inc
    Average 90 stars, based on 1 article reviews
    smart-seq2 library preparation - by Bioz Stars, 2026-06
    90/100 stars
    		  Buy from Supplier
    vahts mrnaseq v3 library prep kit for illumina smart-seq2  (Illumina Inc)
    90
    Illumina Inc vahts mrnaseq v3 library prep kit for illumina smart-seq2
    Increased chromatin accessibility in knockout round spermatids. A).Volcano plot of DEGs between control and Eif5a SKO samples.FDR<0.05. B.The average tag density plot(top pannel) and heatmaps (bottom pannel)around TSS (±3 kb) for the enrichment of ATAC‐seq reads in control and Eif5a SKO round spermatids. C).Plot shows Gain and Loss sites in all control and Eif5a SKO sample replicates. D).Venn diagram showing the overlap of differential peaks identified by CUT&Tag and ATAC‐seq between WT and CKO groups. E).Four‐quadrant scatter plot comparing the log 2 fold changes of significantly differential peaks (FDR < 0.05) from H3K4me3 CUT&Tag (x‐axis) and ATAC‐seq (y‐axis). The Pearson correlation coefficient for the compared data is 0.468. Pearson's *r* = 0.468. F) Venn diagram show shared genes between ATAC‐seq (FDR<0.05) <t>and</t> <t>Smart‐seq2</t> (FDR<0.05, FC>1.5).
    Vahts Mrnaseq V3 Library Prep Kit For Illumina Smart Seq2, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq2+libraries/pm38402947-134-9-16?v=Illumina+Inc
    Average 90 stars, based on 1 article reviews
    vahts mrnaseq v3 library prep kit for illumina smart-seq2 - by Bioz Stars, 2026-06
    90/100 stars
    		  Buy from Supplier
    vahts mrna-seq v3 library prep kit for illumina smart-seq2  (Illumina Inc)
    90
    Illumina Inc vahts mrna-seq v3 library prep kit for illumina smart-seq2
    Increased chromatin accessibility in knockout round spermatids. A).Volcano plot of DEGs between control and Eif5a SKO samples.FDR<0.05. B.The average tag density plot(top pannel) and heatmaps (bottom pannel)around TSS (±3 kb) for the enrichment of ATAC‐seq reads in control and Eif5a SKO round spermatids. C).Plot shows Gain and Loss sites in all control and Eif5a SKO sample replicates. D).Venn diagram showing the overlap of differential peaks identified by CUT&Tag and ATAC‐seq between WT and CKO groups. E).Four‐quadrant scatter plot comparing the log 2 fold changes of significantly differential peaks (FDR < 0.05) from H3K4me3 CUT&Tag (x‐axis) and ATAC‐seq (y‐axis). The Pearson correlation coefficient for the compared data is 0.468. Pearson's *r* = 0.468. F) Venn diagram show shared genes between ATAC‐seq (FDR<0.05) <t>and</t> <t>Smart‐seq2</t> (FDR<0.05, FC>1.5).
    Vahts Mrna Seq V3 Library Prep Kit For Illumina Smart Seq2, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq2+libraries/pmc11785586-127-9-16?v=Illumina+Inc
    Average 90 stars, based on 1 article reviews
    vahts mrna-seq v3 library prep kit for illumina smart-seq2 - by Bioz Stars, 2026-06
    90/100 stars
    		  Buy from Supplier
    smart-seq2 transcriptome libraries  (Broad Institute Inc)
    90
    Broad Institute Inc smart-seq2 transcriptome libraries
    Increased chromatin accessibility in knockout round spermatids. A).Volcano plot of DEGs between control and Eif5a SKO samples.FDR<0.05. B.The average tag density plot(top pannel) and heatmaps (bottom pannel)around TSS (±3 kb) for the enrichment of ATAC‐seq reads in control and Eif5a SKO round spermatids. C).Plot shows Gain and Loss sites in all control and Eif5a SKO sample replicates. D).Venn diagram showing the overlap of differential peaks identified by CUT&Tag and ATAC‐seq between WT and CKO groups. E).Four‐quadrant scatter plot comparing the log 2 fold changes of significantly differential peaks (FDR < 0.05) from H3K4me3 CUT&Tag (x‐axis) and ATAC‐seq (y‐axis). The Pearson correlation coefficient for the compared data is 0.468. Pearson's *r* = 0.468. F) Venn diagram show shared genes between ATAC‐seq (FDR<0.05) <t>and</t> <t>Smart‐seq2</t> (FDR<0.05, FC>1.5).
    Smart Seq2 Transcriptome Libraries, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq2+libraries/10__1172_slash_jci165616-307-0-9?v=Broad+Institute+Inc
    Average 90 stars, based on 1 article reviews
    smart-seq2 transcriptome libraries - by Bioz Stars, 2026-06
    90/100 stars
    		  Buy from Supplier
    smart-seq2 libraries  (Broad Technology Labs)
    90
    Broad Technology Labs smart-seq2 libraries
    Increased chromatin accessibility in knockout round spermatids. A).Volcano plot of DEGs between control and Eif5a SKO samples.FDR<0.05. B.The average tag density plot(top pannel) and heatmaps (bottom pannel)around TSS (±3 kb) for the enrichment of ATAC‐seq reads in control and Eif5a SKO round spermatids. C).Plot shows Gain and Loss sites in all control and Eif5a SKO sample replicates. D).Venn diagram showing the overlap of differential peaks identified by CUT&Tag and ATAC‐seq between WT and CKO groups. E).Four‐quadrant scatter plot comparing the log 2 fold changes of significantly differential peaks (FDR < 0.05) from H3K4me3 CUT&Tag (x‐axis) and ATAC‐seq (y‐axis). The Pearson correlation coefficient for the compared data is 0.468. Pearson's *r* = 0.468. F) Venn diagram show shared genes between ATAC‐seq (FDR<0.05) <t>and</t> <t>Smart‐seq2</t> (FDR<0.05, FC>1.5).
    Smart Seq2 Libraries, supplied by Broad Technology Labs, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq2+libraries/pm37749326-358-0-5?v=Broad+Technology+Labs
    Average 90 stars, based on 1 article reviews
    smart-seq2 libraries - by Bioz Stars, 2026-06
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Increased chromatin accessibility in knockout round spermatids. A).Volcano plot of DEGs between control and Eif5a SKO samples.FDR<0.05. B.The average tag density plot(top pannel) and heatmaps (bottom pannel)around TSS (±3 kb) for the enrichment of ATAC‐seq reads in control and Eif5a SKO round spermatids. C).Plot shows Gain and Loss sites in all control and Eif5a SKO sample replicates. D).Venn diagram showing the overlap of differential peaks identified by CUT&Tag and ATAC‐seq between WT and CKO groups. E).Four‐quadrant scatter plot comparing the log 2 fold changes of significantly differential peaks (FDR < 0.05) from H3K4me3 CUT&Tag (x‐axis) and ATAC‐seq (y‐axis). The Pearson correlation coefficient for the compared data is 0.468. Pearson's *r* = 0.468. F) Venn diagram show shared genes between ATAC‐seq (FDR<0.05) and Smart‐seq2 (FDR<0.05, FC>1.5).

    Journal: Advanced Science

    Article Title: EIF5A Couples Translational Control With Transcriptional Reprogramming Through Chromocenter Reorganization During Spermiogenesis

    doi: 10.1002/advs.202517423

    Figure Lengend Snippet: Increased chromatin accessibility in knockout round spermatids. A).Volcano plot of DEGs between control and Eif5a SKO samples.FDR<0.05. B.The average tag density plot(top pannel) and heatmaps (bottom pannel)around TSS (±3 kb) for the enrichment of ATAC‐seq reads in control and Eif5a SKO round spermatids. C).Plot shows Gain and Loss sites in all control and Eif5a SKO sample replicates. D).Venn diagram showing the overlap of differential peaks identified by CUT&Tag and ATAC‐seq between WT and CKO groups. E).Four‐quadrant scatter plot comparing the log 2 fold changes of significantly differential peaks (FDR < 0.05) from H3K4me3 CUT&Tag (x‐axis) and ATAC‐seq (y‐axis). The Pearson correlation coefficient for the compared data is 0.468. Pearson's *r* = 0.468. F) Venn diagram show shared genes between ATAC‐seq (FDR<0.05) and Smart‐seq2 (FDR<0.05, FC>1.5).

    Article Snippet: The Smart‐seq2 library sequencing was performed by Novogene on Illumina platforms, generating 150 bp paired‐end reads.

    Techniques: Knock-Out, Control

    Proteomic alterations associated with transcriptional changes induced by Eif5a deletion. A).Venn diagram of shared genes between Smart‐seq2 (P value<0.05, FC>1.5) and Proteomics (P<0.05, FC>1.5) analyses. B).GO enrichment analysis based on the 119 commonly upregulated genes. C).QRT‐PCR analysis of candidate genes that were consistently dysregulated in both the transcriptome and proteome of Eif5a SKO testes. Data are presented as mean ± SD from three independent biological replicates (n = 3). Statistical significance was determined using a two‐tailed, unpaired Student's t‐test (*P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001). D). Western blots show SPATA1, SPACA3 and SPACA9 proteins in Eif5a SKO and control mice. β‐Actin served as the loading control. E). IGV visualization of genomic regions harboring acrosome‐related ( Spaca3, Ly6K,Spaca9,Spata1,Lamp2 ) and microtubule‐associated ( Ccdc169, Dynlt3 ) genes. Top: ATAC‐seq tracks showing chromatin accessibility in control (blue) versus SKO (red) round spermatids. Bottom: Corresponding Smart‐seq2 coverage.

    Journal: Advanced Science

    Article Title: EIF5A Couples Translational Control With Transcriptional Reprogramming Through Chromocenter Reorganization During Spermiogenesis

    doi: 10.1002/advs.202517423

    Figure Lengend Snippet: Proteomic alterations associated with transcriptional changes induced by Eif5a deletion. A).Venn diagram of shared genes between Smart‐seq2 (P value<0.05, FC>1.5) and Proteomics (P<0.05, FC>1.5) analyses. B).GO enrichment analysis based on the 119 commonly upregulated genes. C).QRT‐PCR analysis of candidate genes that were consistently dysregulated in both the transcriptome and proteome of Eif5a SKO testes. Data are presented as mean ± SD from three independent biological replicates (n = 3). Statistical significance was determined using a two‐tailed, unpaired Student's t‐test (*P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001). D). Western blots show SPATA1, SPACA3 and SPACA9 proteins in Eif5a SKO and control mice. β‐Actin served as the loading control. E). IGV visualization of genomic regions harboring acrosome‐related ( Spaca3, Ly6K,Spaca9,Spata1,Lamp2 ) and microtubule‐associated ( Ccdc169, Dynlt3 ) genes. Top: ATAC‐seq tracks showing chromatin accessibility in control (blue) versus SKO (red) round spermatids. Bottom: Corresponding Smart‐seq2 coverage.

    Article Snippet: The Smart‐seq2 library sequencing was performed by Novogene on Illumina platforms, generating 150 bp paired‐end reads.

    Techniques: Quantitative RT-PCR, Two Tailed Test, Western Blot, Control